Package: magi
Type: Package
Title: MAnifold-Constrained Gaussian Process Inference
Version: 1.2.5
Date: 2025-10-22
Authors@R: 
  c(person(given = "Shihao",
           family = "Yang",
           role = c("aut", "cre"),
           email = "shihao.yang@isye.gatech.edu",
           comment = c(ORCID = "0000-0003-3910-4969")),
    person(given = "Samuel W.K.",
           family = "Wong",
           role = "aut",
           comment = c(ORCID = "0000-0002-7325-7267")),
    person(given = "S.C.",
           family = "Kou",
           role = c("ctb", "cph"),
           comment = c(role = "Contributor of MAGI method development"))
           )
Encoding: UTF-8
Description: Provides fast and accurate inference for the parameter
        estimation problem in Ordinary Differential Equations,
        including the case when there are unobserved system components.
        Implements the MAGI method (MAnifold-constrained Gaussian
        process Inference) of Yang, Wong, and Kou (2021)
        <doi:10.1073/pnas.2020397118>. A user guide is provided by the
        accompanying software paper Wong, Yang, and Kou (2024)
        <doi:10.18637/jss.v109.i04>.
URL: https://doi.org/10.18637/jss.v109.i04
License: MIT + file LICENSE
VignetteBuilder: knitr
Imports: Rcpp (>= 1.0.6), gridExtra, gridBase, grid, methods, deSolve
LinkingTo: Rcpp, RcppArmadillo, BH, roptim
RoxygenNote: 7.3.1
Suggests: testthat, mvtnorm, covr, knitr, MASS, rmarkdown, markdown
Depends: R (>= 3.6.0)
NeedsCompilation: yes
Maintainer: Shihao Yang <shihao.yang@isye.gatech.edu>
Packaged: 2026-06-19 08:34:05 UTC; root
Author: Shihao Yang [aut, cre] (ORCID:
        <https://orcid.org/0000-0003-3910-4969>), Samuel W.K. Wong
        [aut] (ORCID: <https://orcid.org/0000-0002-7325-7267>), S.C.
        Kou [ctb, cph] (role: Contributor of MAGI method development)
Repository: https://shihao-yang.r-universe.dev
Date/Publication: 2025-10-22 17:40:02 UTC
RemoteUrl: https://github.com/cran/magi
RemoteRef: HEAD
RemoteSha: c7529470be556a7027971d87ae7cb238ab80feaf